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LigPlot用于绘制蛋白配体相互作用的睫毛图,比较适合蛋白和蛋白的相互作用绘图,这方面目前可替代的软件很少。 官网 LigPlot+ home page首先获得一个学术许可。 LigPlot是一款常用于分析和可视化蛋白质-配体(ligand)相互作用的工具。 它能够生成包含蛋白质残基与配体原子间相互作用信息的二维图形,这些信息对于理解分子识别的机制至关重要。 本文介绍了两个免费的工具,用于在分子对接后分析配体结合模式并绘制2D图。 网页端的PoseView可以直接通过PDBID或上传文件进行分析,而离线端的LigPlot+和LeView则提供了方便的本地分析和绘图功能。
LigPlot +是原始的LIGPLOT程序的后继产品, 该程序用于自动生成2D配体-蛋白质相互作用图。 它从直观的Java界面运行,该界面允许通过鼠标单击和拖动操作在屏幕上编辑图。 蛋白小分子互作2D图软件LigPlot+下载链接和安装运行方式(Win版) LigPlot+是一款基于java界面运行的2D分子间相互作用图绘制软件,可通过鼠标点击和拖动操作在屏幕上编辑图形,也可通过调节参数进行设置。
LigPlot是EMBL-EBI开发的2D分子互作可视化工具,支持蛋白-配体、蛋白-蛋白及抗原-抗体相互作用绘图。 通过edu邮箱申请后下载LigPlus.zip,需Java 17环境。
LigPlot + 是LIGPLOT和DIMPLOT项目的图形终端。 绘图生成的项目可以交互式的在界面上编辑,然后写PostScript文件来绘图或者转换成其他的图像格式。 除此之外,你可以叠加相关的LIGPLOTs 蛋白结合相似或者相同的配体,或者相同/相似的配体在不同的蛋白中。 在使用 LIGPLOT 进行蛋白质-配体相互作用可视化时,如何正确解析和输入 PDB 文件是确保其准确识别氢键和疏水相互作用的关键。
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